Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Gm12887B1AVM1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Gm13474-201ENSMUST00000122466 815 ntBASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm12887B1AVM1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Gm715-201ENSMUST00000117865 831 ntBASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Gm16061-201ENSMUST00000122167 857 ntBASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Gm10052-201ENSMUST00000168019 960 ntBASIC12.43□□□□□ -0.42
Gm12887B1AVM1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Gm7729-201ENSMUST00000050143 801 ntBASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm12887B1AVM1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Mir6404-201ENSMUST00000183699 94 ntBASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Gm21814-202ENSMUST00000203277 873 ntBASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms