Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd3B1AR17 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15□□□□□ -0.01
Chd3B1AR17 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd3B1AR17 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd3B1AR17 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chd3B1AR17 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chd3B1AR17 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd3B1AR17 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd3B1AR17 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd3B1AR17 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chd3B1AR17 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Gm45612-201ENSMUST00000211320 160 ntBASIC14.99□□□□□ -0.01
Chd3B1AR17 Gm5186-201ENSMUST00000218781 920 ntBASIC14.99□□□□□ -0.01
Chd3B1AR17 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chd3B1AR17 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Gm11745-201ENSMUST00000121669 448 ntBASIC14.99□□□□□ -0.01
Chd3B1AR17 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.99□□□□□ -0.01
Chd3B1AR17 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.99□□□□□ -0.01
Chd3B1AR17 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd3B1AR17 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.98□□□□□ -0.01
Chd3B1AR17 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.98□□□□□ -0.01
Chd3B1AR17 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.98□□□□□ -0.01
Chd3B1AR17 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd3B1AR17 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chd3B1AR17 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd3B1AR17 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd3B1AR17 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Rpph1-201ENSMUST00000175096 319 ntBASIC14.97□□□□□ -0.01
Chd3B1AR17 Gm43438-201ENSMUST00000198133 379 ntBASIC14.97□□□□□ -0.01
Chd3B1AR17 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.97□□□□□ -0.01
Chd3B1AR17 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.97□□□□□ -0.01
Chd3B1AR17 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chd3B1AR17 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.97□□□□□ -0.01
Chd3B1AR17 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.97□□□□□ -0.01
Chd3B1AR17 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.97□□□□□ -0.01
Chd3B1AR17 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.97□□□□□ -0.01
Chd3B1AR17 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chd3B1AR17 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Chd3B1AR17 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd3B1AR17 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Chd3B1AR17 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd3B1AR17 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd3B1AR17 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd3B1AR17 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd3B1AR17 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms