Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Gm5682-201ENSMUST00000173402 505 ntBASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Gm18622-201ENSMUST00000219361 595 ntBASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh2d4bA6X942 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.41■□□□□ 0.22
Sh2d4bA6X942 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Mir1895-201ENSMUST00000122615 79 ntBASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Gm27321-201ENSMUST00000185021 205 ntBASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Gm37153-201ENSMUST00000193637 231 ntBASIC16.4■□□□□ 0.22
Sh2d4bA6X942 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.4■□□□□ 0.22
Sh2d4bA6X942 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sh2d4bA6X942 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh2d4bA6X942 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms