Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.48□□□□□ -0.57
Col6a5A6H584 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.48□□□□□ -0.57
Col6a5A6H584 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.47□□□□□ -0.57
Col6a5A6H584 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm37466-201ENSMUST00000195692 652 ntBASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm9522-201ENSMUST00000182394 926 ntBASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.47□□□□□ -0.57
Col6a5A6H584 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.47□□□□□ -0.57
Col6a5A6H584 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.47□□□□□ -0.57
Col6a5A6H584 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col6a5A6H584 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col6a5A6H584 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.46□□□□□ -0.57
Col6a5A6H584 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Col6a5A6H584 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Col6a5A6H584 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Col6a5A6H584 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.46□□□□□ -0.57
Col6a5A6H584 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.46□□□□□ -0.57
Col6a5A6H584 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col6a5A6H584 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a5A6H584 Gm15678-201ENSMUST00000117573 960 ntBASIC11.46□□□□□ -0.58
Col6a5A6H584 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.46□□□□□ -0.58
Col6a5A6H584 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a5A6H584 Gm17794-201ENSMUST00000220252 955 ntBASIC11.46□□□□□ -0.58
Col6a5A6H584 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.46□□□□□ -0.58
Col6a5A6H584 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Col6a5A6H584 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a5A6H584 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms