Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm45167-201ENSMUST00000208007 322 ntBASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Chchd1-203ENSMUST00000224633 557 ntBASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Auts2-212ENSMUST00000178555 309 ntBASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfap99A0A140LIX9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap99A0A140LIX9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap99A0A140LIX9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfap99A0A140LIX9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.33■□□□□ 0.53
Cfap99A0A140LIX9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Gm11025-201ENSMUST00000140773 466 ntBASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfap99A0A140LIX9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Gm8344-201ENSMUST00000119813 856 ntBASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfap99A0A140LIX9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cfap99A0A140LIX9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cfap99A0A140LIX9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms