Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm9172-201ENSMUST00000212092 954 ntBASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm5580A0A0N4SVP8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Rprl3-201ENSMUST00000157400 290 ntBASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm33142-201ENSMUST00000193913 867 ntBASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm5580A0A0N4SVP8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gm5580A0A0N4SVP8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm14722-201ENSMUST00000118943 689 ntBASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm10819-201ENSMUST00000099988 561 ntBASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm5580A0A0N4SVP8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.71■□□□□ 0.27
Gm5580A0A0N4SVP8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms