Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm11336-201ENSMUST00000118168 334 ntBASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm22240-201ENSMUST00000175225 82 ntBASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm29707-201ENSMUST00000196325 491 ntBASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm3375-201ENSMUST00000203929 796 ntBASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Arhgef4-208ENSMUST00000211073 171 ntBASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms