Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 AW822252-206ENSMUST00000208904 237 ntBASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Mir5126-201ENSMUST00000175513 77 ntBASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm6089-201ENSMUST00000197666 938 ntBASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm7222-201ENSMUST00000117512 906 ntBASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Gm12350-201ENSMUST00000121208 462 ntBASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13n-1A0A0G2JEU8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms