Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Gm6089-201ENSMUST00000197666 938 ntBASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trbv30A0A0B4J1P1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trbv30A0A0B4J1P1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trbv30A0A0B4J1P1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trbv30A0A0B4J1P1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm14722-201ENSMUST00000118943 689 ntBASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trbv30A0A0B4J1P1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trbv30A0A0B4J1P1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms