Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv3A0A0A6YYE2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm12441-201ENSMUST00000121806 588 ntBASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv3A0A0A6YYE2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Gm10566-201ENSMUST00000086739 996 ntBASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trbv3A0A0A6YYE2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv3A0A0A6YYE2 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv3A0A0A6YYE2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trbv3A0A0A6YYE2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm12008-201ENSMUST00000117791 755 ntBASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm14722-201ENSMUST00000118943 689 ntBASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm10052-201ENSMUST00000168019 960 ntBASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms