Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Gm6659-201ENSMUST00000174752 547 ntBASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm29518-201ENSMUST00000190858 372 ntBASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.88□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.87□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Gm37305-201ENSMUST00000195714 4279 ntBASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ighv1-11A0A0A6YWI9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms