Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm11355-201ENSMUST00000121120 306 ntBASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm6257-201ENSMUST00000163864 910 ntBASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm22697-201ENSMUST00000175194 63 ntBASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm43799-201ENSMUST00000201845 579 ntBASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms