Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Gm13474-201ENSMUST00000122466 815 ntBASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Gm10602-201ENSMUST00000098239 609 ntBASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Trav6-5A0A075B6B5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-5A0A075B6B5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.9□□□□□ -0.51
Trav6-5A0A075B6B5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6-5A0A075B6B5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Gm23547-201ENSMUST00000158210 271 ntBASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Gm37179-201ENSMUST00000194862 823 ntBASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Gm44430-201ENSMUST00000203376 995 ntBASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6-5A0A075B6B5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Gm10052-201ENSMUST00000168019 960 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Gm37856-201ENSMUST00000191634 999 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Gm3375-201ENSMUST00000203929 796 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Gm7370-201ENSMUST00000219471 767 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Gm7729-201ENSMUST00000050143 801 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6-5A0A075B6B5 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6-5A0A075B6B5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms