Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Gm44454-201ENSMUST00000198541 138 ntBASIC12.61□□□□□ -0.39
Trav18A0A075B656 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.61□□□□□ -0.39
Trav18A0A075B656 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.61□□□□□ -0.39
Trav18A0A075B656 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav18A0A075B656 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.59□□□□□ -0.39
Trav18A0A075B656 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Gm27742-201ENSMUST00000184667 60 ntBASIC12.59□□□□□ -0.39
Trav18A0A075B656 Gm9172-201ENSMUST00000212092 954 ntBASIC12.59□□□□□ -0.39
Trav18A0A075B656 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav18A0A075B656 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms