Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav8-1A0A075B641 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.05□□□□□ -0.64
Trav8-1A0A075B641 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Gm18958-201ENSMUST00000174258 762 ntBASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Gm10602-201ENSMUST00000098239 609 ntBASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Actl10-202ENSMUST00000226583 1501 ntBASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav8-1A0A075B641 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav8-1A0A075B641 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms