Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 AV026068-213ENSMUST00000223675 1171 ntBASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Gm15590-201ENSMUST00000078419 552 ntBASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav13d-1A0A075B606 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Gm5364-201ENSMUST00000216789 889 ntBASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav13d-1A0A075B606 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trav13d-1A0A075B606 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms