Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.02□□□□□ -0.49
Trav9-1A0A075B601 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Gm44454-201ENSMUST00000198541 138 ntBASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9-1A0A075B601 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Gm37736-201ENSMUST00000193564 2802 ntBASIC12□□□□□ -0.49
Trav9-1A0A075B601 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Vti1a-206ENSMUST00000225529 1244 ntBASIC12□□□□□ -0.49
Trav9-1A0A075B601 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12□□□□□ -0.49
Trav9-1A0A075B601 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9-1A0A075B601 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms