Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm8825-201ENSMUST00000182565 998 ntBASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm4518-201ENSMUST00000182638 718 ntBASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav6-1A0A075B5Z8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm9172-201ENSMUST00000212092 954 ntBASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav6-1A0A075B5Z8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trav6-1A0A075B5Z8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav6-1A0A075B5Z8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm19164-201ENSMUST00000210667 640 ntBASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav6-1A0A075B5Z8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6-1A0A075B5Z8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms