Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Gm6089-201ENSMUST00000197666 938 ntBASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv4A0A075B5I2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.39■□□□□ 0.06
Trbv4A0A075B5I2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Gm24589-201ENSMUST00000116692 94 ntBASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv4A0A075B5I2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbv4A0A075B5I2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Gm10819-201ENSMUST00000099988 561 ntBASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv4A0A075B5I2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Sybu-209ENSMUST00000228639 4113 ntBASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv4A0A075B5I2 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms