Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pfdn5Q9WU28 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn5Q9WU28 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn5Q9WU28 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Gm36967-201ENSMUST00000193814 266 ntBASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn5Q9WU28 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms