Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col13a1Q9R1N9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col13a1Q9R1N9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col13a1Q9R1N9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.08□□□□□ -0.31
Col13a1Q9R1N9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col13a1Q9R1N9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col13a1Q9R1N9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Gm14127-201ENSMUST00000117906 678 ntBASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Gm37153-201ENSMUST00000193637 231 ntBASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col13a1Q9R1N9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Gm13597-201ENSMUST00000121239 375 ntBASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Gm22175-201ENSMUST00000175007 78 ntBASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col13a1Q9R1N9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Gm11745-201ENSMUST00000121669 448 ntBASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col13a1Q9R1N9 Gm43474-201ENSMUST00000196415 774 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms