Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx5Q9JL61 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx5Q9JL61 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.21■□□□□ 0.18
Rfx5Q9JL61 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rfx5Q9JL61 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rfx5Q9JL61 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx5Q9JL61 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.19■□□□□ 0.18
Rfx5Q9JL61 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx5Q9JL61 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx5Q9JL61 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfx5Q9JL61 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms