Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smco4Q9JIS3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smco4Q9JIS3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.39□□□□□ -0.43
Smco4Q9JIS3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smco4Q9JIS3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.38□□□□□ -0.43
Smco4Q9JIS3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco4Q9JIS3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco4Q9JIS3 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms