Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Gm13312-201ENSMUST00000119631 718 ntBASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Gm25406-201ENSMUST00000157599 105 ntBASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccl28Q9JIL2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ccl28Q9JIL2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Gm7367-201ENSMUST00000057611 492 ntBASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccl28Q9JIL2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Grk6-207ENSMUST00000225925 2769 ntBASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccl28Q9JIL2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ccl28Q9JIL2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms