Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Gm15427-201ENSMUST00000117288 531 ntBASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Gm16198-201ENSMUST00000118766 670 ntBASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Gm6736-201ENSMUST00000166583 948 ntBASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ube3bQ9ES34 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Gm14822-201ENSMUST00000122247 291 ntBASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ube3bQ9ES34 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.2■□□□□ 0.5
Ube3bQ9ES34 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3bQ9ES34 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Gm43575-201ENSMUST00000196420 516 ntBASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3bQ9ES34 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Gm23935-201ENSMUST00000102303 57 ntBASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Gm24270-201ENSMUST00000102326 57 ntBASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3bQ9ES34 Gm24245-201ENSMUST00000157318 57 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms