Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube4bQ9ES00 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Mir5122-201ENSMUST00000175004 89 ntBASIC14.81□□□□□ -0.04
Ube4bQ9ES00 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4bQ9ES00 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Gm7791-201ENSMUST00000219066 539 ntBASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.8□□□□□ -0.04
Ube4bQ9ES00 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4bQ9ES00 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms