Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dap3Q9ER88 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Dap3Q9ER88 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dap3Q9ER88 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Dap3Q9ER88 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Dap3Q9ER88 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.17□□□□□ -0.14
Dap3Q9ER88 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gm18101-201ENSMUST00000215769 548 ntBASIC14.17□□□□□ -0.14
Dap3Q9ER88 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.17□□□□□ -0.14
Dap3Q9ER88 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Dap3Q9ER88 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.16□□□□□ -0.14
Dap3Q9ER88 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.16□□□□□ -0.14
Dap3Q9ER88 Gm21559-201ENSMUST00000220638 855 ntBASIC14.16□□□□□ -0.14
Dap3Q9ER88 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Gm8587-201ENSMUST00000076538 843 ntBASIC14.16□□□□□ -0.14
Dap3Q9ER88 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Dap3Q9ER88 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.15□□□□□ -0.14
Dap3Q9ER88 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Gm6433-201ENSMUST00000118634 875 ntBASIC14.15□□□□□ -0.14
Dap3Q9ER88 Gm15565-201ENSMUST00000118890 427 ntBASIC14.15□□□□□ -0.14
Dap3Q9ER88 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms