Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Vps35Q9EQH3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Gm7230-201ENSMUST00000173026 815 ntBASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Gm18195-201ENSMUST00000207604 706 ntBASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Vps35Q9EQH3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Vps35Q9EQH3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Gm7461-201ENSMUST00000058918 827 ntBASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Vps35Q9EQH3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Gm15358-201ENSMUST00000119249 520 ntBASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Gm27646-201ENSMUST00000183989 110 ntBASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Gm10060-201ENSMUST00000212002 111 ntBASIC15.39■□□□□ 0.05
Vps35Q9EQH3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Mzt1-203ENSMUST00000227948 952 ntBASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.39■□□□□ 0.05
Vps35Q9EQH3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms