Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Gm19164-201ENSMUST00000210667 640 ntBASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col4a3bpQ9EQG9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a3bpQ9EQG9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Rps4l-201ENSMUST00000071745 943 ntBASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a3bpQ9EQG9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Gm18622-201ENSMUST00000219361 595 ntBASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Col4a3bpQ9EQG9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms