Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mmp1bQ9EPL6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Mmp1bQ9EPL6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mmp1bQ9EPL6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mmp1bQ9EPL6 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.58□□□□□ -0.23
Mmp1bQ9EPL6 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Gm44430-201ENSMUST00000203376 995 ntBASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mmp1bQ9EPL6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm10052-201ENSMUST00000168019 960 ntBASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm6623-201ENSMUST00000173570 544 ntBASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Mir6404-201ENSMUST00000183699 94 ntBASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm7729-201ENSMUST00000050143 801 ntBASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Mmp1bQ9EPL6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Mir770-201ENSMUST00000103252 94 ntBASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Mmp1bQ9EPL6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp1bQ9EPL6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp1bQ9EPL6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.55□□□□□ -0.24
Mmp1bQ9EPL6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp1bQ9EPL6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mmp1bQ9EPL6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms