Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.2■□□□□ 0.82
U2af1Q9D883 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
U2af1Q9D883 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
U2af1Q9D883 Zkscan3-208ENSMUST00000224820 5398 ntBASIC20.2■□□□□ 0.82
U2af1Q9D883 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
U2af1Q9D883 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
U2af1Q9D883 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
U2af1Q9D883 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
U2af1Q9D883 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.19■□□□□ 0.82
U2af1Q9D883 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
U2af1Q9D883 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
U2af1Q9D883 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
U2af1Q9D883 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
U2af1Q9D883 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
U2af1Q9D883 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
U2af1Q9D883 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.18■□□□□ 0.82
U2af1Q9D883 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
U2af1Q9D883 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.18■□□□□ 0.82
U2af1Q9D883 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.18■□□□□ 0.82
U2af1Q9D883 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.18■□□□□ 0.82
U2af1Q9D883 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.18■□□□□ 0.82
U2af1Q9D883 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.18■□□□□ 0.82
U2af1Q9D883 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
U2af1Q9D883 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
U2af1Q9D883 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.17■□□□□ 0.82
U2af1Q9D883 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.17■□□□□ 0.82
U2af1Q9D883 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Gm4995-201ENSMUST00000117247 432 ntBASIC20.17■□□□□ 0.82
U2af1Q9D883 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.17■□□□□ 0.82
U2af1Q9D883 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.17■□□□□ 0.82
U2af1Q9D883 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
U2af1Q9D883 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
U2af1Q9D883 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.16■□□□□ 0.82
U2af1Q9D883 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.16■□□□□ 0.82
U2af1Q9D883 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.16■□□□□ 0.82
U2af1Q9D883 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
U2af1Q9D883 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.15■□□□□ 0.82
U2af1Q9D883 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC20.15■□□□□ 0.82
U2af1Q9D883 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms