Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tube1Q9D6T1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tube1Q9D6T1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tube1Q9D6T1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tube1Q9D6T1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Tube1Q9D6T1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tube1Q9D6T1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.08■□□□□ 0.33
Tube1Q9D6T1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tube1Q9D6T1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tube1Q9D6T1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tube1Q9D6T1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tube1Q9D6T1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tube1Q9D6T1 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.08■□□□□ 0.33
Tube1Q9D6T1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tube1Q9D6T1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.08■□□□□ 0.32
Tube1Q9D6T1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.07■□□□□ 0.32
Tube1Q9D6T1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Gm9727-201ENSMUST00000161387 555 ntBASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tube1Q9D6T1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms