Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Rps4l-201ENSMUST00000071745 943 ntBASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
5530400C23RikQ9D3I0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Gm27646-201ENSMUST00000183989 110 ntBASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Gm5864-201ENSMUST00000202263 970 ntBASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
5530400C23RikQ9D3I0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Gm15358-201ENSMUST00000119249 520 ntBASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
5530400C23RikQ9D3I0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Mir8098-201ENSMUST00000184011 137 ntBASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.09■□□□□ 0.01
5530400C23RikQ9D3I0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms