Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Upk1aQ9D132 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Upk1aQ9D132 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Upk1aQ9D132 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Upk1aQ9D132 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Upk1aQ9D132 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Upk1aQ9D132 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.58□□□□□ -0.07
Upk1aQ9D132 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Upk1aQ9D132 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Upk1aQ9D132 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Upk1aQ9D132 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.58□□□□□ -0.08
Upk1aQ9D132 Gm9013-201ENSMUST00000132939 882 ntBASIC14.58□□□□□ -0.08
Upk1aQ9D132 Gm23547-201ENSMUST00000158210 271 ntBASIC14.58□□□□□ -0.08
Upk1aQ9D132 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.58□□□□□ -0.08
Upk1aQ9D132 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.58□□□□□ -0.08
Upk1aQ9D132 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Upk1aQ9D132 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.57□□□□□ -0.08
Upk1aQ9D132 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Gm14722-201ENSMUST00000118943 689 ntBASIC14.57□□□□□ -0.08
Upk1aQ9D132 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.57□□□□□ -0.08
Upk1aQ9D132 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Gm25406-201ENSMUST00000157599 105 ntBASIC14.57□□□□□ -0.08
Upk1aQ9D132 Gm10231-201ENSMUST00000181584 441 ntBASIC14.57□□□□□ -0.08
Upk1aQ9D132 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Gm10175-202ENSMUST00000208752 441 ntBASIC14.57□□□□□ -0.08
Upk1aQ9D132 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.57□□□□□ -0.08
Upk1aQ9D132 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.57□□□□□ -0.08
Upk1aQ9D132 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Upk1aQ9D132 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Upk1aQ9D132 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.56□□□□□ -0.08
Upk1aQ9D132 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Upk1aQ9D132 Gm6623-201ENSMUST00000173570 544 ntBASIC14.56□□□□□ -0.08
Upk1aQ9D132 Gm6345-202ENSMUST00000180900 204 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms