Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tmem88Q9D0N8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Tmem88Q9D0N8 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tmem88Q9D0N8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tmem88Q9D0N8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tmem88Q9D0N8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tmem88Q9D0N8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tmem88Q9D0N8 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.21□□□□□ -0.46
Tmem88Q9D0N8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tmem88Q9D0N8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Mir6349-201ENSMUST00000184059 97 ntBASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Gm18666-201ENSMUST00000190039 958 ntBASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Trmt13-210ENSMUST00000198454 880 ntBASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tmem88Q9D0N8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Gm11249-201ENSMUST00000117071 859 ntBASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tmem88Q9D0N8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tmem88Q9D0N8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Tmem88Q9D0N8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tmem88Q9D0N8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tmem88Q9D0N8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms