Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lysmd1Q9D0E3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lysmd1Q9D0E3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 AU022133-201ENSMUST00000200601 873 ntBASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Gm3961-201ENSMUST00000204425 994 ntBASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lysmd1Q9D0E3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd1Q9D0E3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Gm5354-201ENSMUST00000182417 973 ntBASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd1Q9D0E3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Gm5187-201ENSMUST00000117317 991 ntBASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Gm22902-201ENSMUST00000158488 302 ntBASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.27■□□□□ 0.2
Lysmd1Q9D0E3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms