Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otud1Q9CUB6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otud1Q9CUB6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otud1Q9CUB6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Gm10499-201ENSMUST00000174094 934 ntBASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.51□□□□□ -0.09
Otud1Q9CUB6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otud1Q9CUB6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms