Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Gm28630-201ENSMUST00000187806 498 ntBASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Gm9063-201ENSMUST00000223299 582 ntBASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldnd1Q9CQX5 Syt7-204ENSMUST00000223586 1344 ntBASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Gm12490-201ENSMUST00000120255 560 ntBASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Gm18187-201ENSMUST00000196476 984 ntBASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Cldnd1Q9CQX5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cldnd1Q9CQX5 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldnd1Q9CQX5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms