Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retreg3Q9CQV4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Gm12350-201ENSMUST00000121208 462 ntBASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Gm45574-201ENSMUST00000210921 331 ntBASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retreg3Q9CQV4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Gm6550-201ENSMUST00000187574 993 ntBASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Gm38114-201ENSMUST00000191877 1232 ntBASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 AC132446.1-201ENSMUST00000222655 226 ntBASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retreg3Q9CQV4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms