Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Gm10812-201ENSMUST00000099864 546 ntBASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TpbpbQ9CQC0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TpbpbQ9CQC0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Mir6404-201ENSMUST00000183699 94 ntBASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TpbpbQ9CQC0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Mir5130-201ENSMUST00000175160 84 ntBASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Gm27389-201ENSMUST00000183622 195 ntBASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TpbpbQ9CQC0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms