Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ska1Q9CPV1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Gm45328-201ENSMUST00000210942 917 ntBASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ska1Q9CPV1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Gm11950-201ENSMUST00000121615 838 ntBASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.53□□□□□ -0.08
Ska1Q9CPV1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ska1Q9CPV1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms