Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Gm17271-201ENSMUST00000165535 355 ntBASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.61□□□□□ -0.39
Prpf8Q99PV0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf8Q99PV0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Rprl2-201ENSMUST00000157150 290 ntBASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Thap2-203ENSMUST00000218989 527 ntBASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Prpf8Q99PV0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms