Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn4Q99P72 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.68■□□□□ 0.74
Rtn4Q99P72 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Gm23757-201ENSMUST00000158353 100 ntBASIC19.68■□□□□ 0.74
Rtn4Q99P72 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.68■□□□□ 0.74
Rtn4Q99P72 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.68■□□□□ 0.74
Rtn4Q99P72 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.68■□□□□ 0.74
Rtn4Q99P72 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4Q99P72 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.67■□□□□ 0.74
Rtn4Q99P72 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
Rtn4Q99P72 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4Q99P72 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Gm37935-201ENSMUST00000192012 982 ntBASIC19.66■□□□□ 0.74
Rtn4Q99P72 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4Q99P72 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn4Q99P72 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms