Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Gm25745-201ENSMUST00000174945 133 ntBASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 App-207ENSMUST00000227737 2827 ntBASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp1b1Q99LU0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Gm12895-201ENSMUST00000122214 226 ntBASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp1b1Q99LU0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp1b1Q99LU0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms