Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.1■□□□□ 0.49
Col20a1Q923P0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col20a1Q923P0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.09■□□□□ 0.49
Col20a1Q923P0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Gm8396-201ENSMUST00000057361 823 ntBASIC18.09■□□□□ 0.49
Col20a1Q923P0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col20a1Q923P0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Gm9385-201ENSMUST00000117563 472 ntBASIC18.08■□□□□ 0.49
Col20a1Q923P0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.08■□□□□ 0.49
Col20a1Q923P0 Gm20553-201ENSMUST00000204205 844 ntBASIC18.08■□□□□ 0.49
Col20a1Q923P0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.08■□□□□ 0.49
Col20a1Q923P0 Gm10154-201ENSMUST00000084445 354 ntBASIC18.08■□□□□ 0.49
Col20a1Q923P0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col20a1Q923P0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col20a1Q923P0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.07■□□□□ 0.48
Col20a1Q923P0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.07■□□□□ 0.48
Col20a1Q923P0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col20a1Q923P0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Gm14701-201ENSMUST00000117156 348 ntBASIC18.06■□□□□ 0.48
Col20a1Q923P0 Gm11745-201ENSMUST00000121669 448 ntBASIC18.06■□□□□ 0.48
Col20a1Q923P0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.06■□□□□ 0.48
Col20a1Q923P0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.06■□□□□ 0.48
Col20a1Q923P0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms