Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Gm13223-201ENSMUST00000118609 747 ntBASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sf3b3Q921M3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Gm6415-201ENSMUST00000118488 348 ntBASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Gm27306-201ENSMUST00000183970 107 ntBASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sf3b3Q921M3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.4■□□□□ 0.54
Sf3b3Q921M3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Gm9824-201ENSMUST00000178707 561 ntBASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Gm29541-201ENSMUST00000191351 678 ntBASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sf3b3Q921M3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sf3b3Q921M3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sf3b3Q921M3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sf3b3Q921M3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Gm13015-201ENSMUST00000118674 204 ntBASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sf3b3Q921M3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms