Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb2Q91Y00 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb2Q91Y00 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb2Q91Y00 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb2Q91Y00 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb2Q91Y00 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhb2Q91Y00 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb2Q91Y00 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Gm45167-201ENSMUST00000208007 322 ntBASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Psmb5-202ENSMUST00000227257 622 ntBASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Sybu-209ENSMUST00000228639 4113 ntBASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb2Q91Y00 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Gm9682-201ENSMUST00000197505 556 ntBASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 AW822252-206ENSMUST00000208904 237 ntBASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb2Q91Y00 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb2Q91Y00 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Gm14140-201ENSMUST00000119999 995 ntBASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb2Q91Y00 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms