Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhb3Q91XZ7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Gm11355-201ENSMUST00000121120 306 ntBASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Gm37319-201ENSMUST00000193500 636 ntBASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Thoc7-209ENSMUST00000225325 765 ntBASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb3Q91XZ7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 AC153961.1-201ENSMUST00000217760 385 ntBASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb3Q91XZ7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms