Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb6Q91XZ4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Gm7230-201ENSMUST00000173026 815 ntBASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb6Q91XZ4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb6Q91XZ4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Pcdhb6Q91XZ4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Gm7222-201ENSMUST00000117512 906 ntBASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Gm37153-201ENSMUST00000193637 231 ntBASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb6Q91XZ4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms