Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Gm14057-201ENSMUST00000120631 482 ntBASIC17.57■□□□□ 0.4
Trex1Q91XB0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.57■□□□□ 0.4
Trex1Q91XB0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trex1Q91XB0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.56■□□□□ 0.4
Trex1Q91XB0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Mir449b-201ENSMUST00000104833 80 ntBASIC17.56■□□□□ 0.4
Trex1Q91XB0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.56■□□□□ 0.4
Trex1Q91XB0 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trex1Q91XB0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.55■□□□□ 0.4
Trex1Q91XB0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trex1Q91XB0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trex1Q91XB0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm22065-201ENSMUST00000103753 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm22066-201ENSMUST00000103761 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm24932-201ENSMUST00000103763 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm24115-201ENSMUST00000103799 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm22190-201ENSMUST00000103827 110 ntBASIC17.53■□□□□ 0.4
Trex1Q91XB0 Gm22191-201ENSMUST00000103831 110 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms